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RNAi Experiment: JA:F56A4.h Ace View of JA:F56A4.h
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F56A4.4
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:2447520..2449722)
Transcript overlap: 441 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 357
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.317
Wormbase (BLAST) RNAi primary
External "F56A4.4" Links  Wormbase NCBI
Gene Inhibited  Y45G12C.3
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:2555799..2558001)
Transcript overlap: 441 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 336
Relative score: 0.941 (Best raw score= for Gene )
Specificity index: 0.298
Wormbase (BLAST) RNAi primary
External "Y45G12C.3" Links  Wormbase NCBI
Gene Inhibited  F56A4.7 (str-267)
Description of "F56A4.7"  Associated GO Term : G-protein coupled receptor activity
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (V:2447520..2449722)
Transcript overlap: 280 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 217
Specificity index: 0.193
Wormbase (BLAST) RNAi primary
External "F56A4.7" Links  Wormbase NCBI
Gene Inhibited  Y45G12C.12 (str-154)
Description of "Y45G12C.12"  Associated GO Term : G-protein coupled receptor activity
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (V:2555799..2558001)
Transcript overlap: 280 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 217
Relative score: 0.608 (Best raw score= for Gene )
Specificity index: 0.193
Wormbase (BLAST) RNAi primary
External "Y45G12C.12" Links  Wormbase NCBI
JA:F56A4.h Phenotypes Help with Phenotypes
Phenotype  WT
JA:F56A4.h Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F56A4.h (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F56A4.4 Browse using GBrowse
Gene Graph
Gene Plot of F56A4.7 Browse using GBrowse
Gene Graph
Gene Plot of Y45G12C.12 Browse using GBrowse
Gene Graph
Gene Plot of Y45G12C.3 Browse using GBrowse
Gene Graph