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RNAi Experiment: JA:F56H1.4 Ace View of JA:F56H1.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F56H1.4 (rpt-5)
Description of "F56H1.4"  rpt-5 encodes a triple A ATPase subunit of the 26S proteasome's 19S regulatory particle (RP) base subcomplex; RPT-5 is required for embryonic, larval, and germline development and by homology, is predicted to function in unfolding protein substrates and translocating them into the core proteolytic particle (CP) of the proteasome.
KOG Annotation  26S proteasome regulatory complex, ATPase RPT5
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:5742390..5743588)
Transcript overlap: 1031 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 968
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F56H1.4" Links  Wormbase NCBI
JA:F56H1.4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Adult  Ste brood size range (1 out of 5)
Phenotype  Ocs 1-12 cell arrest
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif Help
JA:F56H1.4 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F56H1.4 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F56H1.4 Browse using GBrowse
Gene Graph