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RNAi Experiment: JA:F58B3.2 Ace View of JA:F58B3.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F58B3.2 (lys-5)
Description of "F58B3.2"  Associated GO Term : lysozyme activity
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:11623891..11625558)
Transcript overlap: 648 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 585
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.612
Wormbase (BLAST) RNAi primary
External "F58B3.2" Links  Wormbase NCBI
Gene Inhibited  F58B3.3 (lys-6)
Description of "F58B3.3"  lys-6 (lys=laterally symmetrical) encodes a microRNA, a small non-protein coding RNA and was the first miRNA to have a role in nervous system development in vivo; lys-6 is involved in the pathway for functional lateralization of the chemosensory ASE neuron; lys-6 controls the asymmetrical expression of the gcy chemoreceptors, gcy-5 and gcy-7, in ASER and ASEL; reporter gene fusions indicate that lys-6 is expressed in one pair of tail neurons and seven head neurons including ASEL, but not in ASER.
Evidence for Inhibition 
Sliding Window Raw score: 298
Relative score: 0.509 (Best raw score= for Gene )
Specificity index: 0.312
Wormbase (BLAST) RNAi primary
External "F58B3.3" Links  Wormbase NCBI
Gene Inhibited  F58B3.1 (lys-4)
Description of "F58B3.1"  Associated GO Term : lysozyme activity
Evidence for Inhibition 
Sliding Window Raw score: 73
Relative score: 0.125 (Best raw score= for Gene )
Specificity index: 0.076
Wormbase (BLAST) RNAi primary
External "F58B3.1" Links  Wormbase NCBI
JA:F58B3.2 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F58B3.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F58B3.2 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F58B3.2 Browse using GBrowse
Gene Graph
Gene Plot of F58B3.3 Browse using GBrowse
Gene Graph
Gene Plot of F58B3.1 Browse using GBrowse
Gene Graph