Link to F59H6.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to ZK678.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T24A6.1Link to C04C3.4Link to T07F10.5Link to C03B8.2Link to W02F12.1Link to W05G11.2geneMap Link to W05G11.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T07F10.2Link to T24A6.1Link to ZK678.3geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T07G12.8Link to T07G12.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C12C8.3aLink to C12C8.3bgeneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C04C3.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C03B8.2Link to T07F10.5Link to ZK678.3Link to W02F12.1Link to T24A6.1geneMap Link to F40H6.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T07F10.2Link to T07F10.5RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to W02A11.6Link to W05G11.2Link to F59H6.7Link to F08F1.9Link to C04C3.4Link to C03B8.2Link to ZK678.3Link to T24A6.1Link to F23H12.10Link to T07F10.2geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:F59H6.3 Ace View of JA:F59H6.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F59H6.3
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:2017674..2019485)
Transcript overlap: 216 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 132
Relative score: 0.268 (Best raw score= for Gene )
Specificity index: 0.074
Wormbase (BLAST) RNAi primary
External "F59H6.3" Links  Wormbase NCBI
Gene Inhibited  ZK678.3
Description of "ZK678.3"  Associated GO Term : regulation of cell cycle
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 65
Relative score: 0.132 (Best raw score= for Gene )
Specificity index: 0.037
Wormbase (BLAST) RNAi primary
External "ZK678.3" Links  Wormbase NCBI
Gene Inhibited  W05G11.2
Description of "W05G11.2"  Associated GO Term : regulation of cell cycle
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 108
Relative score: 0.22 (Best raw score= for Gene )
Specificity index: 0.061
Wormbase (BLAST) RNAi primary
External "W05G11.2" Links  Wormbase NCBI
Gene Inhibited  W02A11.6
Evidence for Inhibition 
Sliding Window Raw score: 100
Relative score: 0.203 (Best raw score= for Gene )
Specificity index: 0.056
Wormbase (BLAST) RNAi primary
External "W02A11.6" Links  Wormbase NCBI
Gene Inhibited  ZK1225.7
Evidence for Inhibition 
Sliding Window Raw score: 120
Relative score: 0.244 (Best raw score= for Gene )
Specificity index: 0.068
Wormbase (BLAST) RNAi primary
External "ZK1225.7" Links  Wormbase NCBI
Gene Inhibited  Y75B12A.1
Evidence for Inhibition 
Sliding Window Raw score: 492
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.277
Wormbase (BLAST) RNAi primary
External "Y75B12A.1" Links  Wormbase NCBI
Gene Inhibited  T07G12.8
Evidence for Inhibition 
Sliding Window Raw score: 70
Relative score: 0.142 (Best raw score= for Gene )
Specificity index: 0.039
Wormbase (BLAST) RNAi primary
External "T07G12.8" Links  Wormbase NCBI
Gene Inhibited  F23H12.10
Evidence for Inhibition 
Sliding Window Raw score: 84
Relative score: 0.171 (Best raw score= for Gene )
Specificity index: 0.047
Wormbase (BLAST) RNAi secondary
External "F23H12.10" Links  Wormbase NCBI
Gene Inhibited  C04C3.4
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 92
Relative score: 0.187 (Best raw score= for Gene )
Specificity index: 0.052
Wormbase (BLAST) RNAi primary
External "C04C3.4" Links  Wormbase NCBI
Gene Inhibited  F40H6.6
Evidence for Inhibition 
Sliding Window Raw score: 300
Relative score: 0.61 (Best raw score= for Gene )
Specificity index: 0.169
Wormbase (BLAST) RNAi primary
External "F40H6.6" Links  Wormbase NCBI
Gene Inhibited  T07F10.5
KOG Annotation  G2/Mitotic-specific cyclin A
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 93
Relative score: 0.189 (Best raw score= for Gene )
Specificity index: 0.052
Wormbase (BLAST) RNAi primary
External "T07F10.5" Links  Wormbase NCBI
Gene Inhibited  F27D4.3
Evidence for Inhibition 
Sliding Window Raw score: 121
Relative score: 0.246 (Best raw score= for Gene )
Specificity index: 0.068
Wormbase (BLAST) RNAi primary
External "F27D4.3" Links  Wormbase NCBI
JA:F59H6.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F59H6.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F59H6.3 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of ZK678.3 Browse using GBrowse
Gene Graph
Gene Plot of W05G11.2 Browse using GBrowse
Gene Graph
Gene Plot of W02A11.6 Browse using GBrowse
Gene Graph
Gene Plot of ZK1225.7 Browse using GBrowse
Gene Graph
Gene Plot of Y75B12A.1 Browse using GBrowse
Gene Graph
Gene Plot of T07G12.8 Browse using GBrowse
Gene Graph
Gene Plot of F23H12.10 Browse using GBrowse
Gene Graph
Gene Plot of C04C3.4 Browse using GBrowse
Gene Graph
Gene Plot of F40H6.6 Browse using GBrowse
Gene Graph
Gene Plot of F59H6.3 Browse using GBrowse
Gene Graph
Gene Plot of F27D4.3 Browse using GBrowse
Gene Graph
Gene Plot of T07F10.5 Browse using GBrowse
Gene Graph