Link to K08A8.3RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F28F9.3RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to R08F11.1RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:K08A8.3 Ace View of JA:K08A8.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K08A8.3 (coh-1)
Description of "K08A8.3"  coh-1 encodes a RAD21 homolog that affects embryonic viability and is believed to affect cohesion of sister chromatids in somatic cells; expressed in the distal tip cells of the gonad, embryonic, and somatic cells
KOG Annotation  Sister chromatid cohesion complex Cohesin, subunit RAD21/SCC1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:7472958..7475252)
Transcript overlap: 916 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 811
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.833
Wormbase (BLAST) RNAi primary
External "K08A8.3" Links  Wormbase NCBI
Gene Inhibited  F28F9.3
Evidence for Inhibition 
Sliding Window Raw score: 81
Relative score: 0.1 (Best raw score= for Gene )
Specificity index: 0.083
External "F28F9.3" Links  Wormbase NCBI
Gene Inhibited  R08F11.1
KOG Annotation  Predicted bile acid beta-glucosidase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 82
Relative score: 0.101 (Best raw score= for Gene )
Specificity index: 0.084
External "R08F11.1" Links  Wormbase NCBI
JA:K08A8.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:K08A8.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_K08A8.3 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F28F9.3 Browse using GBrowse
Gene Graph
Gene Plot of R08F11.1 Browse using GBrowse
Gene Graph
Gene Plot of K08A8.3 Browse using GBrowse
Gene Graph