Link to K08C9.7RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H06I04.4b.1Link to H06I04.4b.2Link to H06I04.4a.3Link to H06I04.4a.2Link to H06I04.4a.1geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to K08C9.7Link to F34H10.1geneMap Link to F34H10.1RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H06I04.4a.3Link to H06I04.4a.1Link to H06I04.4b.2Link to H06I04.4a.2Link to H06I04.4b.1Link to Y105E8B.10geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:K08C9.7 Ace View of JA:K08C9.7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K08C9.7
KOG Annotation  Ubiquitin/40S ribosomal protein S27a fusion
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:11494927..11496578)
Transcript overlap: 345 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 261
Relative score: 0.949 (Best raw score= for Gene )
Specificity index: 0.324
Wormbase (BLAST) RNAi primary
External "K08C9.7" Links  Wormbase NCBI
Gene Inhibited  Y105E8B.10
Evidence for Inhibition 
Sliding Window Raw score: 275
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.341
Wormbase (BLAST) RNAi primary
External "Y105E8B.10" Links  Wormbase NCBI
Gene Inhibited  F34H10.1
KOG Annotation  Ubiquitin/40S ribosomal protein S27a fusion
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 270
Relative score: 0.982 (Best raw score= for Gene )
Specificity index: 0.335
Wormbase (BLAST) RNAi primary
External "F34H10.1" Links  Wormbase NCBI
JA:K08C9.7 Phenotypes Help with Phenotypes
Phenotype  WT
JA:K08C9.7 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_K08C9.7 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y105E8B.10 Browse using GBrowse
Gene Graph
Gene Plot of K08C9.7 Browse using GBrowse
Gene Graph
Gene Plot of F34H10.1 Browse using GBrowse
Gene Graph