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RNAi Experiment: JA:K10D2.7 Ace View of JA:K10D2.7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K10D2.7
Description of "K10D2.7"  Associated GO Term : sulfur metabolism
KOG Annotation  Molybdopterin converting factor, small subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:5195848..5196713)
Transcript overlap: 255 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 150
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.445
Wormbase (BLAST) RNAi primary
External "K10D2.7" Links  Wormbase NCBI
Gene Inhibited  K10D2.1
Description of "K10D2.1"  Associated GO Term : transcription regulator activity
KOG Annotation  Protein phosphatase 1, regulatory subunit, and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:5195848..5196713)
Transcript overlap: 138 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 117
Relative score: 0.78 (Best raw score= for Gene )
Specificity index: 0.347
External "K10D2.1" Links  Wormbase NCBI
Gene Inhibited  K10D2.6 (emb-8)
Description of "K10D2.6"  Uncloned locus required for embryonic viability, for the normal generation of anterior-posterior asymmetry in the early embryo, and for normal P Granule and GLP-1 asymmetry in early embryos.
KOG Annotation  NADP/FAD dependent oxidoreductase
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 70 nt Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 70
Relative score: 0.467 (Best raw score= for Gene )
Specificity index: 0.208
External "K10D2.6" Links  Wormbase NCBI
JA:K10D2.7 Phenotypes Help with Phenotypes
Phenotype  WT
JA:K10D2.7 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_K10D2.7 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of K10D2.7 Browse using GBrowse
Gene Graph
Gene Plot of K10D2.1 Browse using GBrowse
Gene Graph
Gene Plot of K10D2.6 Browse using GBrowse
Gene Graph