Link to K12D12.3RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to B0491.2.2Link to B0491.2.1Link to F27C1.8.2Link to F27C1.8.1geneMap Link to K12D12.4aLink to K12D12.2.1Link to K12D12.2.2Link to K12D12.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to B0491.2.2Link to B0491.2.1Link to F27C1.8.2Link to F27C1.8.1geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:K12D12.3 Ace View of JA:K12D12.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K12D12.3 (col-84)
Description of "K12D12.3"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:11868650..11869733)
Transcript overlap: 894 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 810
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.864
Wormbase (BLAST) RNAi primary
External "K12D12.3" Links  Wormbase NCBI
Gene Inhibited  K12D12.2 (npp-3)
Description of "K12D12.2"  npp-3 encodes a predicted nucleoporin that is a homolog of vertebrate Nup205, and is required for normal nuclear pore complex distribution in the nuclear envelope, affects nuclear exclusion of large non-nuclear macromolecules, chromatin condensation, early embryonic viability, body integrity and locomotion.
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (II:11868650..11869733)
Transcript overlap: 127 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 127
Relative score: 0.157 (Best raw score= for Gene )
Specificity index: 0.136
Wormbase (BLAST) RNAi primary
External "K12D12.2" Links  Wormbase NCBI
JA:K12D12.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:K12D12.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_K12D12.3 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of K12D12.3 Browse using GBrowse
Gene Graph
Gene Plot of K12D12.2 Browse using GBrowse
Gene Graph