Link to M01B12.1RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y52E8A.6Link to R09A1.4Link to H31G24.2geneMap RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to R09A1.4geneMap Link to Y52E8A.6RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H31G24.2Link to M01B12.1geneMap Link to R09A1.4RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:M01B12.1 Ace View of JA:M01B12.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  M01B12.1
Description of "M01B12.1"  Associated GO Term : RNA binding
KOG Annotation  Reverse transcriptase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:3086997..3088145)
Transcript overlap: 465 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 381
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.322
Wormbase (BLAST) RNAi primary
External "M01B12.1" Links  Wormbase NCBI
Gene Inhibited  H31G24.2
Evidence for Inhibition 
Sliding Window Raw score: 326
Relative score: 0.856 (Best raw score= for Gene )
Specificity index: 0.275
External "H31G24.2" Links  Wormbase NCBI
Gene Inhibited  Y52E8A.6
Description of "Y52E8A.6"  Associated GO Term : RNA binding
KOG Annotation  Uncharacterized conserved protein
Reverse transcriptase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 253
Relative score: 0.664 (Best raw score= for Gene )
Specificity index: 0.214
External "Y52E8A.6" Links  Wormbase NCBI
Gene Inhibited  R09A1.4
Description of "R09A1.4"  Associated GO Term : RNA binding
KOG Annotation  Reverse transcriptase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 225
Relative score: 0.591 (Best raw score= for Gene )
Specificity index: 0.19
External "R09A1.4" Links  Wormbase NCBI
JA:M01B12.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:M01B12.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_M01B12.1 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of H31G24.2 Browse using GBrowse
Gene Graph
Gene Plot of M01B12.1 Browse using GBrowse
Gene Graph
Gene Plot of Y52E8A.6 Browse using GBrowse
Gene Graph
Gene Plot of R09A1.4 Browse using GBrowse
Gene Graph