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RNAi Experiment: JA:R05D8.o Ace View of JA:R05D8.o
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F54E2.2
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:2795634..2796812)
Transcript overlap: 581 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 455
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.762
Wormbase (BLAST) RNAi primary
External "F54E2.2" Links  Wormbase NCBI
Gene Inhibited  F54E2.3 (ketn-1)
Description of "F54E2.3"  The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:2795634..2796812)
Transcript overlap: 287 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 142
Relative score: 0.312 (Best raw score= for Gene )
Specificity index: 0.238
Wormbase (BLAST) RNAi primary
External "F54E2.3" Links  Wormbase NCBI
JA:R05D8.o Phenotypes Help with Phenotypes
Phenotype  WT
JA:R05D8.o Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_R05D8.o (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F54E2.2 Browse using GBrowse
Gene Graph
Gene Plot of F54E2.3 Browse using GBrowse
Gene Graph