Link to T01G9.6b.2Link to T01G9.6a.1Link to T01G9.6a.2Link to T01G9.6b.1Link to T01G9.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:T01G9.4 Ace View of JA:T01G9.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T01G9.4 (npp-2)
Description of "T01G9.4"  npp-2 encodes a protein with low similarity to rat nucleoporin Nup75 that affects embryonic viability and has a variety of other defects in RNAi screens including: nuclear morphology, growth, fertility, locomotion, and egg laying; enriched in oocytes.
KOG Annotation  Nuclear pore complex component (sc Nup85)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:8292103..8293300)
Transcript overlap: 855 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 771
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T01G9.4" Links  Wormbase NCBI
JA:T01G9.4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 20 - 40 %
Larval  Gro
Adult  Clr
Phenotype  Nmo Differentiated, not enclosed
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
JA:T01G9.4 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_T01G9.4 (PCR_reagent)
Remark  P1 divides too late
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of T01G9.4 Browse using GBrowse
Gene Graph