Link to T03F1.11Link to T03F1.7RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T03F1.11Link to T03F1.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:T03F1.11 Ace View of JA:T03F1.11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T03F1.11
Description of "T03F1.11"  Associated GO Term : calcium ion binding
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:3853862..3854785)
Transcript overlap: 322 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 295
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.611
Wormbase (BLAST) RNAi primary
External "T03F1.11" Links  Wormbase NCBI
Gene Inhibited  T03F1.7
Description of "T03F1.7"  Associated GO Term : rRNA (adenine) methyltransferase activity
KOG Annotation  Predicted ribosomal RNA adenine dimethylase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (I:3853862..3854785)
Transcript overlap: 229 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 188
Relative score: 0.637 (Best raw score= for Gene )
Specificity index: 0.389
Wormbase (BLAST) RNAi primary
External "T03F1.7" Links  Wormbase NCBI
JA:T03F1.11 Phenotypes Help with Phenotypes
Phenotype  WT
JA:T03F1.11 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_T03F1.11 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of T03F1.7 Browse using GBrowse
Gene Graph
Gene Plot of T03F1.11 Browse using GBrowse
Gene Graph