Link to T05G5.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T05G5.3.1Link to T05G5.3.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T05G5.4Link to T05G5.5Link to T05G5.6.1Link to T05G5.6.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:T05G5.4 Ace View of JA:T05G5.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T05G5.4
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:9748673..9749474)
Transcript overlap: 225 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 162
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T05G5.4" Links  Wormbase NCBI
Gene Inhibited  T05G5.3 (cdk-1)
Description of "T05G5.3"  cdk-1 encodes a cyclin-dependent kinase, orthologous to and functionally interchangeable with CDC28 from S. cerevisiae; CDK-1 is required for cell-cycle progression through M phase in both meiosis and mitosis.
KOG Annotation  Protein kinase PCTAIRE and related kinases
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 75 nt Explain types of evidence for RNAi inhibition
External "T05G5.3" Links  Wormbase NCBI
Gene Inhibited  T05G5.5
Description of "T05G5.5"  This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
KOG Annotation  Similar to bacterial dephospho-CoA kinase
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 7 nt Explain types of evidence for RNAi inhibition
External "T05G5.5" Links  Wormbase NCBI
JA:T05G5.4 Phenotypes Help with Phenotypes
Phenotype  WT
JA:T05G5.4 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_T05G5.4 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of T05G5.4 Browse using GBrowse
Gene Graph
Gene Plot of T05G5.3 Browse using GBrowse
Gene Graph
Gene Plot of T05G5.5 Browse using GBrowse
Gene Graph