Link to T06G6.1Link to T06G6.2RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F28C12.2Link to F28C12.5geneMap Link to F28C12.5RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F28C12.7Link to T06G6.1Link to F28C12.2geneMap Link to F28C12.6Link to F28C12.2RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T06G6.1Link to F28C12.7Link to F28C12.5Link to F28C12.4geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:T06G6.1 Ace View of JA:T06G6.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T06G6.1 (sra-23)
Description of "T06G6.1"  Associated GO Term : transmembrane receptor activity
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:12703563..12704711)
Transcript overlap: 879 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 774
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.426
Wormbase (BLAST) RNAi primary
External "T06G6.1" Links  Wormbase NCBI
Gene Inhibited  F28C12.5 (sra-21)
Description of "F28C12.5"  Associated GO Term : transmembrane receptor activity
Evidence for Inhibition 
Sliding Window Raw score: 626
Relative score: 0.809 (Best raw score= for Gene )
Specificity index: 0.344
Wormbase (BLAST) RNAi secondary
External "F28C12.5" Links  Wormbase NCBI
Gene Inhibited  F28C12.2 (sra-18)
Description of "F28C12.2"  Associated GO Term : transmembrane receptor activity
Evidence for Inhibition 
Sliding Window Raw score: 418
Relative score: 0.54 (Best raw score= for Gene )
Specificity index: 0.23
External "F28C12.2" Links  Wormbase NCBI
JA:T06G6.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:T06G6.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_T06G6.1 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F28C12.5 Browse using GBrowse
Gene Graph
Gene Plot of T06G6.1 Browse using GBrowse
Gene Graph
Gene Plot of F28C12.2 Browse using GBrowse
Gene Graph