Link to T07A9.9a.2Link to T07A9.9a.3Link to T07A9.9a.1Link to T07A9.9b.2Link to T07A9.9b.3Link to T07A9.9b.1Link to T07A9.9c.7Link to T07A9.9c.6Link to T07A9.9c.3Link to T07A9.9c.5Link to T07A9.9c.4Link to T07A9.9c.1Link to T07A9.9c.2Link to T07A9.8RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T07A9.9c.7Link to T07A9.9b.3Link to T07A9.9a.3Link to T07A9.9b.1Link to T07A9.9c.4Link to T07A9.9a.2Link to T07A9.9c.6Link to T07A9.9b.2Link to T07A9.9a.1Link to T07A9.9c.1Link to T07A9.9c.5Link to T07A9.9c.2Link to T07A9.9c.3Link to T07A9.8RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F41H8.3Link to F19B2.4geneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y51A2B.7Link to F19B2.4Link to K10G4.7Link to R11G11.10Link to T27C5.14geneMap Link to K10G4.1RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to K07E8.12Link to F41H8.3geneMap Link to F41H8.4RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to R13D11.9Link to K03D7.3Link to Y34D9A.2Link to T27C5.14geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:T07A9.8 Ace View of JA:T07A9.8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T07A9.8
KOG Annotation  Predicted RNA methylase involved in rRNA processing
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:396493..398769)
Transcript overlap: 881 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 755
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.588
Wormbase (BLAST) RNAi primary
External "T07A9.8" Links  Wormbase NCBI
Gene Inhibited  T07A9.9
Description of "T07A9.9"  Associated GO Term : GTP binding
Evidence for Inhibition 
ePCR Transcript overlap: 5 nt Explain types of evidence for RNAi inhibition
External "T07A9.9" Links  Wormbase NCBI
Gene Inhibited  C14C6.11 (sri-72)
Evidence for Inhibition 
Sliding Window Raw score: 69
Relative score: 0.091 (Best raw score= for Gene )
Specificity index: 0.054
External "C14C6.11" Links  Wormbase NCBI
Gene Inhibited  K07E8.12 (sri-44)
Evidence for Inhibition 
Sliding Window Raw score: 314
Relative score: 0.416 (Best raw score= for Gene )
Specificity index: 0.245
External "K07E8.12" Links  Wormbase NCBI
Gene Inhibited  K10G4.7 (srh-262)
Evidence for Inhibition 
Sliding Window Raw score: 74
Relative score: 0.098 (Best raw score= for Gene )
Specificity index: 0.058
External "K10G4.7" Links  Wormbase NCBI
Gene Inhibited  F41H8.3 (srx-30)
Evidence for Inhibition 
Sliding Window Raw score: 72
Relative score: 0.095 (Best raw score= for Gene )
Specificity index: 0.056
External "F41H8.3" Links  Wormbase NCBI
JA:T07A9.8 Phenotypes Help with Phenotypes
Phenotype  Pch
JA:T07A9.8 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_T07A9.8 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C14C6.11 Browse using GBrowse
Gene Graph
Gene Plot of K07E8.12 Browse using GBrowse
Gene Graph
Gene Plot of T07A9.8 Browse using GBrowse
Gene Graph
Gene Plot of K10G4.7 Browse using GBrowse
Gene Graph
Gene Plot of F41H8.3 Browse using GBrowse
Gene Graph
Gene Plot of T07A9.9 Browse using GBrowse
Gene Graph