RNAi Experiment: JA:T07C4.4 |
Ace View of JA:T07C4.4
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Genes Inhibited |
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Gene Inhibited |
T07C4.4 (spp-1) |
Description of "T07C4.4" |
spp-1 encodes a predicted transmembrane protein containing a saposin (B) domain that is a member of a saposin-like protein superfamily containing mammalian NK-lysin and granulysin and the protozoan amoebapores; SPP-1 is predicted to function as a lipid-binding protein with cytotoxic, pore-forming activity, and in vitro, does exhibit antibacterial activity; loss of SPP-1 function via RNA-mediated interference (RNAi) does not, however, result in any abnormalities. |
Evidence for Inhibition |
ePCR |
Status: Best_ePCR (III:10354640..10355640)
Transcript overlap: 498 nt |
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Sliding Window |
Raw score: 477
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.599 |
Wormbase (BLAST) |
RNAi primary |
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External "T07C4.4" Links |
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Gene Inhibited |
T07C4.3 |
Evidence for Inhibition |
ePCR |
Status: Top50_percentile_ePCR (III:10354640..10355640)
Transcript overlap: 340 nt |
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Sliding Window |
Raw score: 319
Relative score: 0.669 (Best raw score= for Gene )
Specificity index: 0.401 |
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External "T07C4.3" Links |
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JA:T07C4.4 Phenotypes |
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Phenotype |
WT
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JA:T07C4.4 Experiment Details |
Ace View |
Laboratory |
JA |
RNAi Reagent & Type |
sjj_T07C4.4 (PCR_reagent) |
Reference |
Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...." |
Date |
2003-1-10 |
Gene Plot of T07C4.4 |
Browse using GBrowse
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Gene Plot of T07C4.3 |
Browse using GBrowse
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