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RNAi Experiment: JA:T10G3.7 Ace View of JA:T10G3.7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  R11G10.1 (avr-15)
Description of "R11G10.1"  avr-15 encodes, via alternative splicing, two glutamate-gated chloride channel subunit homologs; these proteins mediate fast inhibitory glutamatergic neuromuscular transmission, as well as ivermectin sensitivity, and are required for normal pharyngeal function.
KOG Annotation  Ligand-gated ion channel
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:13503179..13504721)
Transcript overlap: 751 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 688
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "R11G10.1" Links  Wormbase NCBI
JA:T10G3.7 Phenotypes Help with Phenotypes
Phenotype  WT
JA:T10G3.7 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_T10G3.7 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of R11G10.1 Browse using GBrowse
Gene Graph