Link to T20F5.2Link to T20F5.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:T20F5.2 Ace View of JA:T20F5.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T20F5.2 (pbs-4)
Description of "T20F5.2"  pbs-4 encodes a B-type subunit of the 26S proteasome's 20S protease core particle; by homology, PBS-4 is predicted to function in ATP/ubiquitin-dependent nonlysosomal protein degradation; loss of pbs-4 activity via RNAi indicates that, in C. elegans, PBS-4 is required for embryonic, germline, and larval development.
KOG Annotation  20S proteasome, regulatory subunit beta type PSMB2/PRE1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:3908486..3909598)
Transcript overlap: 696 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 612
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T20F5.2" Links  Wormbase NCBI
JA:T20F5.2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Phenotype  Ocs 1-12 cell arrest
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif Help
JA:T20F5.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_T20F5.2 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of T20F5.2 Browse using GBrowse
Gene Graph