Link to T23H2.1RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y39B6A.47geneMap Link to Y39B6A.47RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T23H2.1geneMap
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RNAi Experiment: JA:T23H2.1 Ace View of JA:T23H2.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T23H2.1 (npp-12)
Description of "T23H2.1"  npp-12 encodes Gp210, an evolutionarily conserved membrane protein of the nuclear pore complex (NPC); NPP-12 is required for embryonic viability and normal nuclear membrane structures.
KOG Annotation  Nuclear pore complex, gp210 component
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:6450417..6451583)
Transcript overlap: 1043 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 703
Relative score: 0.871 (Best raw score= for Gene )
Specificity index: 0.466
Wormbase (BLAST) RNAi primary
External "T23H2.1" Links  Wormbase NCBI
Gene Inhibited  Y39B6A.47 (nhr-145)
Description of "Y39B6A.47"  Associated GO Term : transcription factor activity
KOG Annotation  Hormone receptors
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (V:19098063..19099228)
Transcript overlap: 891 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 807
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.534
Wormbase (BLAST) RNAi primary
External "Y39B6A.47" Links  Wormbase NCBI
JA:T23H2.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:T23H2.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_T23H2.1 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of T23H2.1 Browse using GBrowse
Gene Graph
Gene Plot of Y39B6A.47 Browse using GBrowse
Gene Graph