Link to K01G5.5.1Link to K01G5.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H04D03.1Link to W03G9.3Link to C38D4.1aLink to Y37D8A.12a.1Link to Y37D8A.12a.2Link to W05F2.2geneMap Link to W03G9.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H04D03.1Link to Y37D8A.12a.1Link to K01G5.3Link to C38D4.1aLink to C38D4.1bLink to W05F2.2Link to Y37D8A.12a.2Link to Y37D8A.12bgeneMap Link to Y37D8A.12a.1Link to Y37D8A.12a.2Link to Y37D8A.12bRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H04D03.1Link to W03G9.3Link to C38D4.1aLink to C38D4.1bLink to W05F2.2Link to K01G5.3geneMap Link to C38D4.1aLink to C38D4.1bRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y37D8A.12a.1Link to W03G9.3Link to K01G5.3Link to Y37D8A.12a.2Link to W05F2.2Link to Y37D8A.12bLink to H04D03.1geneMap Link to W05F2.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to W03G9.3Link to K01G5.3Link to C38D4.1aLink to Y37D8A.12a.2Link to Y37D8A.12a.1Link to H04D03.1Link to C38D4.1bLink to Y37D8A.12bgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:W03G9.3 Ace View of JA:W03G9.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  K01G5.3
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (III:10750506..10751686)
Transcript overlap: 948 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 662
Relative score: 0.74 (Best raw score= for Gene )
Specificity index: 0.191
Wormbase (BLAST) RNAi primary
External "K01G5.3" Links  Wormbase NCBI
Gene Inhibited  W03G9.3
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (I:4960235..4961402)
Transcript overlap: 935 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 721
Relative score: 0.806 (Best raw score= for Gene )
Specificity index: 0.208
Wormbase (BLAST) RNAi primary
External "W03G9.3" Links  Wormbase NCBI
Gene Inhibited  Y37D8A.12
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:12879261..12880448)
Transcript overlap: 957 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 894
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.258
Wormbase (BLAST) RNAi primary
External "Y37D8A.12" Links  Wormbase NCBI
Gene Inhibited  C38D4.1
Evidence for Inhibition 
Sliding Window Raw score: 624
Relative score: 0.698 (Best raw score= for Gene )
Specificity index: 0.18
Wormbase (BLAST) RNAi primary
External "C38D4.1" Links  Wormbase NCBI
Gene Inhibited  W05F2.2
Evidence for Inhibition 
Sliding Window Raw score: 559
Relative score: 0.625 (Best raw score= for Gene )
Specificity index: 0.162
Wormbase (BLAST) RNAi primary
External "W05F2.2" Links  Wormbase NCBI
JA:W03G9.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:W03G9.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_W03G9.3 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of C38D4.1 Browse using GBrowse
Gene Graph
Gene Plot of W03G9.3 Browse using GBrowse
Gene Graph
Gene Plot of K01G5.3 Browse using GBrowse
Gene Graph
Gene Plot of W05F2.2 Browse using GBrowse
Gene Graph
Gene Plot of Y37D8A.12 Browse using GBrowse
Gene Graph