Link to W04A8.1RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y71A12B.13geneMap Link to Y71A12B.13RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentLink to W04A8.1geneMap
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RNAi Experiment: JA:W04A8.1 Ace View of JA:W04A8.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  W04A8.1
Description of "W04A8.1"  W04A8.1 encodes a protein weakly similar to human microcephalin (MCPH1; OMIM:607117, mutated in primary microcephaly); while their primary sequence similarity is very subtle (only being detectable with psi-BLAST on NCBI-nr, using C. briggsae CBG13622 as a query sequence), both W04A8.1 and microcephalin has similar ordering of BRCT domains (one N-terminal, two C-terminal); W04A8.1 has no obvious function in mass RNAi screens.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:13838629..13840147)
Transcript overlap: 823 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 697
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.745
Wormbase (BLAST) RNAi primary
External "W04A8.1" Links  Wormbase NCBI
Gene Inhibited  Y71A12B.13
Description of "Y71A12B.13"  Associated GO Term : intracellular
Evidence for Inhibition 
Sliding Window Raw score: 238
Relative score: 0.341 (Best raw score= for Gene )
Specificity index: 0.255
Wormbase (BLAST) RNAi primary
External "Y71A12B.13" Links  Wormbase NCBI
JA:W04A8.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:W04A8.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_W04A8.1 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of W04A8.1 Browse using GBrowse
Gene Graph
Gene Plot of Y71A12B.13 Browse using GBrowse
Gene Graph