Link to W04A8.2RNAiRNAiRNAi ReagentRNAi ReagentgeneMap Link to Y71H2AM.2RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F45H10.1.2Link to F45H10.1.1Link to F45H10.2.2Link to F45H10.2.1RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:W04A8.2 Ace View of JA:W04A8.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  W04A8.2
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:13840497..13841512)
Transcript overlap: 312 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 270
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.659
Wormbase (BLAST) RNAi primary
External "W04A8.2" Links  Wormbase NCBI
Gene Inhibited  Y71H2AM.2
Description of "Y71H2AM.2"  Associated GO Term : nucleic acid binding
KOG Annotation  Uncharacterized conserved protein, contains C4-type Zn-finger
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 62
Relative score: 0.23 (Best raw score= for Gene )
Specificity index: 0.151
External "Y71H2AM.2" Links  Wormbase NCBI
Gene Inhibited  F45H10.1 (alh-7)
Description of "F45H10.1"  alh-7 encodes an ortholog of the human gene DJ73M23.2 (NAD+-DEPENDENT SUCCINIC SEMIALDEHYDE DEHYDROGENASE; ALDH5A1), which when mutated leads to SSADH deficiency (OMIM:271980).
KOG Annotation  Aldehyde dehydrogenase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 78
Relative score: 0.289 (Best raw score= for Gene )
Specificity index: 0.19
External "F45H10.1" Links  Wormbase NCBI
JA:W04A8.2 Phenotypes Help with Phenotypes
Phenotype  WT
JA:W04A8.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_W04A8.2 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y71H2AM.2 Browse using GBrowse
Gene Graph
Gene Plot of F45H10.1 Browse using GBrowse
Gene Graph
Gene Plot of W04A8.2 Browse using GBrowse
Gene Graph