Link to W09C5.9RNAiRNAiRNAi ReagentRNAi ReagentLink to W09G3.7ageneMap Link to Y71H2AM.2RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F45H10.1.2Link to F45H10.1.1Link to F45H10.2.2Link to F45H10.2.1RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to W09G3.7aLink to W09G3.7bLink to W09G3.3RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentLink to W09C5.9geneMap
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RNAi Experiment: JA:W09C5.9 Ace View of JA:W09C5.9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  W09C5.9
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:13660549..13662183)
Transcript overlap: 141 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 78
Relative score: 0.672 (Best raw score= for Gene )
Specificity index: 0.221
Wormbase (BLAST) RNAi primary
External "W09C5.9" Links  Wormbase NCBI
Gene Inhibited  Y71H2AM.2
Description of "Y71H2AM.2"  Associated GO Term : nucleic acid binding
KOG Annotation  Uncharacterized conserved protein, contains C4-type Zn-finger
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 116
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.329
External "Y71H2AM.2" Links  Wormbase NCBI
Gene Inhibited  F45H10.1 (alh-7)
Description of "F45H10.1"  alh-7 encodes an ortholog of the human gene DJ73M23.2 (NAD+-DEPENDENT SUCCINIC SEMIALDEHYDE DEHYDROGENASE; ALDH5A1), which when mutated leads to SSADH deficiency (OMIM:271980).
KOG Annotation  Aldehyde dehydrogenase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 97
Relative score: 0.836 (Best raw score= for Gene )
Specificity index: 0.275
External "F45H10.1" Links  Wormbase NCBI
Gene Inhibited  W09G3.7
KOG Annotation  RCC1 domain
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 62
Relative score: 0.534 (Best raw score= for Gene )
Specificity index: 0.176
Wormbase (BLAST) RNAi primary
External "W09G3.7" Links  Wormbase NCBI
JA:W09C5.9 Phenotypes Help with Phenotypes
Phenotype  WT
JA:W09C5.9 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_W09C5.9 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y71H2AM.2 Browse using GBrowse
Gene Graph
Gene Plot of W09G3.7 Browse using GBrowse
Gene Graph
Gene Plot of F45H10.1 Browse using GBrowse
Gene Graph
Gene Plot of W09C5.9 Browse using GBrowse
Gene Graph