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RNAi Experiment: JA:W10C8.5 Ace View of JA:W10C8.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  W10C8.5
Description of "W10C8.5"  Associated GO Term : kinase activity
KOG Annotation  Creatine kinases
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:2854212..2855348)
Transcript overlap: 991 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 931
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.537
Wormbase (BLAST) RNAi primary
External "W10C8.5" Links  Wormbase NCBI
Gene Inhibited  F32B5.1
Description of "F32B5.1"  Associated GO Term : kinase activity
KOG Annotation  Creatine kinases
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 804
Relative score: 0.864 (Best raw score= for Gene )
Specificity index: 0.463
Wormbase (BLAST) RNAi primary
External "F32B5.1" Links  Wormbase NCBI
Gene Inhibited  K04F1.1
Description of "K04F1.1"  Associated GO Term : kinase activity
KOG Annotation  Creatine kinases
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 59
Wormbase (BLAST) RNAi secondary
External "K04F1.1" Links  Wormbase NCBI
JA:W10C8.5 Phenotypes Help with Phenotypes
Phenotype  WT
JA:W10C8.5 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_W10C8.5 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F32B5.1 Browse using GBrowse
Gene Graph
Gene Plot of W10C8.5 Browse using GBrowse
Gene Graph
Gene Plot of K04F1.1 Browse using GBrowse
Gene Graph