Link to Y111B2A.27RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to K09E4.1Link to W03H9.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y79H2A.3aLink to Y79H2A.3bLink to Y79H2A.4Link to Y79H2A.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:Y111B2C.f Ace View of JA:Y111B2C.f
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y111B2A.27
Description of "Y111B2A.27"  Associated GO Term : protein kinase activity
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:12530370..12532396)
Transcript overlap: 593 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 551
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.426
Wormbase (BLAST) RNAi primary
External "Y111B2A.27" Links  Wormbase NCBI
Gene Inhibited  K09E4.1
Description of "K09E4.1"  Associated GO Term : protein kinase activity
KOG Annotation  Casein kinase (serine/threonine/tyrosine protein kinase)
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 329
Relative score: 0.597 (Best raw score= for Gene )
Specificity index: 0.254
Wormbase (BLAST) RNAi primary
External "K09E4.1" Links  Wormbase NCBI
Gene Inhibited  Y79H2A.3
Description of "Y79H2A.3"  The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Evidence for Inhibition 
Sliding Window Raw score: 413
Relative score: 0.75 (Best raw score= for Gene )
Specificity index: 0.319
External "Y79H2A.3" Links  Wormbase NCBI
JA:Y111B2C.f Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y111B2C.f Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y111B2C.f (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y111B2A.27 Browse using GBrowse
Gene Graph
Gene Plot of K09E4.1 Browse using GBrowse
Gene Graph
Gene Plot of Y79H2A.3 Browse using GBrowse
Gene Graph