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RNAi Experiment: JA:Y116F11A.zz2 Ace View of JA:Y116F11A.zz2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y43F8C.7
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:19643115..19645598)
Transcript overlap: 490 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 428
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.771
Wormbase (BLAST) RNAi primary
External "Y43F8C.7" Links  Wormbase NCBI
Gene Inhibited  Y43F8C.6
Description of "Y43F8C.6"  Associated GO Term : tRNA ligase activity
KOG Annotation  Predicted DNA-binding protein, contains SANT domain
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (V:19643115..19645598)
Transcript overlap: 148 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 127
Relative score: 0.297 (Best raw score= for Gene )
Specificity index: 0.229
Wormbase (BLAST) RNAi primary
External "Y43F8C.6" Links  Wormbase NCBI
JA:Y116F11A.zz2 Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y116F11A.zz2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y116F11A.zz2 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y43F8C.6 Browse using GBrowse
Gene Graph
Gene Plot of Y43F8C.7 Browse using GBrowse
Gene Graph