Link to Y119C1A.1RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C44E4.3RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:Y119C1a.a Ace View of JA:Y119C1a.a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y119C1A.1
Description of "Y119C1A.1"  Associated GO Term : DNA binding
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:4640697..4643195)
Transcript overlap: 771 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 687
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.805
Wormbase (BLAST) RNAi primary
External "Y119C1A.1" Links  Wormbase NCBI
Gene Inhibited  C44E4.3
Description of "C44E4.3"  Associated GO Term : transferase activity, transferring nitrogenous groups
KOG Annotation  Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:4640697..4643195)
Transcript overlap: 187 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 166
Relative score: 0.242 (Best raw score= for Gene )
Specificity index: 0.195
Wormbase (BLAST) RNAi primary
External "C44E4.3" Links  Wormbase NCBI
JA:Y119C1a.a Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y119C1a.a Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y119C1a.a (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of C44E4.3 Browse using GBrowse
Gene Graph
Gene Plot of Y119C1A.1 Browse using GBrowse
Gene Graph