Link to Y18H1A.1RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y57G11C.6geneMap Link to Y116A8C.41RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T02H6.3RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y54F10AM.7RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y54B9A.1RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T25D1.3RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T05A7.9RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:Y18H1A_68.f Ace View of JA:Y18H1A_68.f
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y18H1A.1
Description of "Y18H1A.1"  Associated GO Term : protein tyrosine phosphatase activity
KOG Annotation  Protein tyrosine phosphatase
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 53 nt Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "Y18H1A.1" Links  Wormbase NCBI
Gene Inhibited  Y116A8C.41
Description of "Y116A8C.41"  Associated GO Term : G-protein coupled receptor activity
Evidence for Inhibition 
Sliding Window Raw score: 103
Relative score: 0.079 (Best raw score= for Gene )
Specificity index: 0.056
External "Y116A8C.41" Links  Wormbase NCBI
Gene Inhibited  T02H6.3
Evidence for Inhibition 
Sliding Window Raw score: 1298
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.702
External "T02H6.3" Links  Wormbase NCBI
Gene Inhibited  Y54F10AM.7
Evidence for Inhibition 
Sliding Window Raw score: 164
Relative score: 0.126 (Best raw score= for Gene )
Specificity index: 0.089
External "Y54F10AM.7" Links  Wormbase NCBI
Gene Inhibited  Y54B9A.1
Evidence for Inhibition 
Sliding Window Raw score: 121
Relative score: 0.093 (Best raw score= for Gene )
Specificity index: 0.065
External "Y54B9A.1" Links  Wormbase NCBI
Gene Inhibited  T25D1.3
Description of "T25D1.3"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
Evidence for Inhibition 
Sliding Window Raw score: 69
Relative score: 0.053 (Best raw score= for Gene )
Specificity index: 0.037
External "T25D1.3" Links  Wormbase NCBI
Gene Inhibited  T05A7.9
Evidence for Inhibition 
Sliding Window Raw score: 95
Relative score: 0.073 (Best raw score= for Gene )
Specificity index: 0.051
External "T05A7.9" Links  Wormbase NCBI
JA:Y18H1A_68.f Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y18H1A_68.f Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y18H1A_68.f (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y116A8C.41 Browse using GBrowse
Gene Graph
Gene Plot of T02H6.3 Browse using GBrowse
Gene Graph
Gene Plot of Y54F10AM.7 Browse using GBrowse
Gene Graph
Gene Plot of Y54B9A.1 Browse using GBrowse
Gene Graph
Gene Plot of Y18H1A.1 Browse using GBrowse
Gene Graph
Gene Plot of T05A7.9 Browse using GBrowse
Gene Graph
Gene Plot of T25D1.3 Browse using GBrowse
Gene Graph