Link to F56A4.12RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y19D10A.11geneMap Link to Y19D10A.11RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F56A4.12geneMap Link to F56A4.11RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y19D10A.10Link to Y39G10AR.18aLink to Y20F4.2geneMap Link to Y19D10A.10RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F56A4.11geneMap RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to AH9.3Link to C35D6.10geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:Y19D10A.f Ace View of JA:Y19D10A.f
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F56A4.12
Description of "F56A4.12"  Associated GO Term : transporter activity
KOG Annotation  Permease of the major facilitator superfamily
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (V:2477847..2480325)
Transcript overlap: 988 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 883
Relative score: 0.928 (Best raw score= for Gene )
Specificity index: 0.396
Wormbase (BLAST) RNAi primary
External "F56A4.12" Links  Wormbase NCBI
Gene Inhibited  Y19D10A.11
Description of "Y19D10A.11"  Associated GO Term : transporter activity
KOG Annotation  Permease of the major facilitator superfamily
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (V:2369886..2372364)
Transcript overlap: 1036 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 952
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.427
Wormbase (BLAST) RNAi primary
External "Y19D10A.11" Links  Wormbase NCBI
Gene Inhibited  F56A4.11
Description of "F56A4.11"  Associated GO Term : transporter activity
KOG Annotation  Permease of the major facilitator superfamily
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 118
Relative score: 0.124 (Best raw score= for Gene )
Specificity index: 0.053
Wormbase (BLAST) RNAi secondary
External "F56A4.11" Links  Wormbase NCBI
Gene Inhibited  Y19D10A.10
Description of "Y19D10A.10"  Associated GO Term : transporter activity
Evidence for Inhibition 
Sliding Window Raw score: 133
Relative score: 0.14 (Best raw score= for Gene )
Specificity index: 0.06
Wormbase (BLAST) RNAi primary
External "Y19D10A.10" Links  Wormbase NCBI
Gene Inhibited  F58E2.1
Evidence for Inhibition 
Sliding Window Raw score: 141
Relative score: 0.148 (Best raw score= for Gene )
Specificity index: 0.063
External "F58E2.1" Links  Wormbase NCBI
JA:Y19D10A.f Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y19D10A.f Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y19D10A.f (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F56A4.12 Browse using GBrowse
Gene Graph
Gene Plot of F56A4.11 Browse using GBrowse
Gene Graph
Gene Plot of Y19D10A.10 Browse using GBrowse
Gene Graph
Gene Plot of Y19D10A.11 Browse using GBrowse
Gene Graph
Gene Plot of F58E2.1 Browse using GBrowse
Gene Graph