Link to Y38C1AB.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y38C1AB.5geneMap Link to Y38C1AB.5RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y38C1AB.1geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:Y38C1AB.e Ace View of JA:Y38C1AB.e
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y38C1AB.1
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:35680..38132)
Transcript overlap: 307 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 223
Relative score: 0.914 (Best raw score= for Gene )
Specificity index: 0.478
Wormbase (BLAST) RNAi primary
External "Y38C1AB.1" Links  Wormbase NCBI
Gene Inhibited  Y38C1AB.5
KOG Annotation  Galactosyltransferases
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:9747..12199)
Transcript overlap: 307 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 244
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.522
Wormbase (BLAST) RNAi primary
External "Y38C1AB.5" Links  Wormbase NCBI
JA:Y38C1AB.e Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y38C1AB.e Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y38C1AB.e (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y38C1AB.1 Browse using GBrowse
Gene Graph
Gene Plot of Y38C1AB.5 Browse using GBrowse
Gene Graph