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RNAi Experiment: JA:Y39G10A_246.i Ace View of JA:Y39G10A_246.i
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y39G10AR.13 (icp-1)
Description of "Y39G10AR.13"  The icp-1 gene encodes a 'chromosomal passenger protein'; inactivation of icp-1 by RNAi leads to a complete failure of chromosome segregation during the first mitotic division of embryonic development.
KOG Annotation  Inner centromere protein (INCENP), C-terminal domain
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:2304764..2307100)
Transcript overlap: 1828 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1723
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y39G10AR.13" Links  Wormbase NCBI
Gene Inhibited  Y39G10AR.9
KOG Annotation  WD40 repeat-containing protein
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 48 nt Explain types of evidence for RNAi inhibition
External "Y39G10AR.9" Links  Wormbase NCBI
JA:Y39G10A_246.i Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Phenotype  Cyk 1-12 cell arrest
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
JA:Y39G10A_246.i Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y39G10A_246.i (PCR_reagent)
Remark  furrow regr; abnorm fem. pronuc.
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y39G10AR.13 Browse using GBrowse
Gene Graph
Gene Plot of Y39G10AR.9 Browse using GBrowse
Gene Graph