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RNAi Experiment: JA:Y39H10A_225.e Ace View of JA:Y39H10A_225.e
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y39H10A.3 (mtm-9)
Description of "Y39H10A.3"  cup-10 is an uncloned locus that affects endocytosis by coelomocytes; the primary phenotype of cup-10 animals is an accumulation of secreted GFP in the pseudocoelom, suggesting a decrease in, or the absence of, endocytosis in coelomocytes
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:3746607..3749405)
Transcript overlap: 1015 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 952
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y39H10A.3" Links  Wormbase NCBI
Gene Inhibited  Y39H10A.6
KOG Annotation  WD40 repeat-containing protein
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 35 nt Explain types of evidence for RNAi inhibition
External "Y39H10A.6" Links  Wormbase NCBI
JA:Y39H10A_225.e Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y39H10A_225.e Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y39H10A_225.e (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y39H10A.6 Browse using GBrowse
Gene Graph
Gene Plot of Y39H10A.3 Browse using GBrowse
Gene Graph