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RNAi Experiment: JA:Y46H3A.e Ace View of JA:Y46H3A.e
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y46H3A.2 (hsp-16.41)
Description of "Y46H3A.2"  hsp-16.41 encodes a 16-kD heat shock protein (HSP) that is a member of the hsp16/hsp20/alphaB-crystallin (HSP16) family of heat shock proteins; an hsp-16.41 reporter fusion, expressed broadly but strongest in intestine and pharynx, is induced in response to heat shock or other environmental stresses; expression is detectable in somatic tissues in post-gastrulation embryos, all larval stages, and in adults; HSP-16.41 is likely to function as a passive ligand temporarily preventing unfolded proteins from aggregating.
KOG Annotation  Alpha crystallins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:1805022..1806080)
Transcript overlap: 432 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 369
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y46H3A.2" Links  Wormbase NCBI
Gene Inhibited  F57G9.6
Evidence for Inhibition 
Sliding Window Raw score: 59
External "F57G9.6" Links  Wormbase NCBI
JA:Y46H3A.e Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y46H3A.e Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y46H3A.e (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y46H3A.2 Browse using GBrowse
Gene Graph
Gene Plot of F57G9.6 Browse using GBrowse
Gene Graph