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RNAi Experiment: JA:Y47G6A_241.b Ace View of JA:Y47G6A_241.b
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y47G6A.6 (pcaf-1)
Description of "Y47G6A.6"  Associated GO Term : N-acetyltransferase activity
KOG Annotation  Histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5 and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:3521231..3523498)
Transcript overlap: 801 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 696
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.868
Wormbase (BLAST) RNAi primary
External "Y47G6A.6" Links  Wormbase NCBI
Gene Inhibited  Y47G6A.19
Description of "Y47G6A.19"  Associated GO Term : carboxypeptidase A activity
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:3521231..3523498)
Transcript overlap: 163 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 163
Relative score: 0.152 (Best raw score= for Gene )
Specificity index: 0.132
Wormbase (BLAST) RNAi primary
External "Y47G6A.19" Links  Wormbase NCBI
JA:Y47G6A_241.b Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y47G6A_241.b Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y47G6A_241.b (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y47G6A.19 Browse using GBrowse
Gene Graph
Gene Plot of Y47G6A.6 Browse using GBrowse
Gene Graph