Link to Y49E10.1Link to Y49E10.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T06A10.2Link to Y37H9A.5geneMap Link to Y49E10.1Link to Y49E10.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T06A10.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y37H9A.5Link to Y49E10.2geneMap
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RNAi Experiment: JA:Y49E10.2 Ace View of JA:Y49E10.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49E10.2
Description of "Y49E10.2"  This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
KOG Annotation  Glutaredoxin-related protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:12372418..12373762)
Transcript overlap: 506 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 464
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.682
Wormbase (BLAST) RNAi primary
External "Y49E10.2" Links  Wormbase NCBI
Gene Inhibited  Y49E10.1 (rpt-6)
Description of "Y49E10.1"  rpt-6 encodes a triple A ATPase that is a subunit of the 26S proteasome 19S regulatory particle (RP) base subcomplex; RPT-6 is required for embryonic and larval development and by homology, is predicted to function in unfolding protein substrates and translocating them into the core proteolytic particle (CP) of the proteasome.
KOG Annotation  26S proteasome regulatory complex, ATPase RPT6
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 75 nt Explain types of evidence for RNAi inhibition
External "Y49E10.1" Links  Wormbase NCBI
Gene Inhibited  Y37H9A.5
Evidence for Inhibition 
Sliding Window Raw score: 123
Relative score: 0.265 (Best raw score= for Gene )
Specificity index: 0.181
Wormbase (BLAST) RNAi primary
External "Y37H9A.5" Links  Wormbase NCBI
Gene Inhibited  T06A10.2
Description of "T06A10.2"  Associated GO Term : structural constituent of ribosome
KOG Annotation  60S ribosomal protein L29
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 93
Relative score: 0.2 (Best raw score= for Gene )
Specificity index: 0.137
Wormbase (BLAST) RNAi primary
External "T06A10.2" Links  Wormbase NCBI
JA:Y49E10.2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 90 %
Larval  Gro
Adult  Clr
JA:Y49E10.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y49E10.2 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y49E10.1 Browse using GBrowse
Gene Graph
Gene Plot of Y37H9A.5 Browse using GBrowse
Gene Graph
Gene Plot of T06A10.2 Browse using GBrowse
Gene Graph
Gene Plot of Y49E10.2 Browse using GBrowse
Gene Graph