Link to Y49F6B.2Link to Y49F6B.1RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
RNAi Experiment: JA:Y49F6B.r Ace View of JA:Y49F6B.r
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49F6B.1 (cyh-1)
KOG Annotation  Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:3506035..3508529)
Transcript overlap: 532 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 427
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y49F6B.1" Links  Wormbase NCBI
JA:Y49F6B.r Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 40 %
Adult  Sck
Phenotype  Pch
JA:Y49F6B.r Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y49F6B.r (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y49F6B.1 Browse using GBrowse
Gene Graph