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RNAi Experiment: JA:Y52B11C.1 Ace View of JA:Y52B11C.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y52B11C.1
KOG Annotation  N-acetylglucosaminyl phosphatidylinositol de-N-acetylase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:11166837..11168727)
Transcript overlap: 456 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 415
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.76
Wormbase (BLAST) RNAi primary
External "Y52B11C.1" Links  Wormbase NCBI
Gene Inhibited  F28D9.4
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:11166837..11168727)
Transcript overlap: 131 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 131
Relative score: 0.316 (Best raw score= for Gene )
Specificity index: 0.24
External "F28D9.4" Links  Wormbase NCBI
JA:Y52B11C.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y52B11C.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y52B11C.1 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F28D9.4 Browse using GBrowse
Gene Graph
Gene Plot of Y52B11C.1 Browse using GBrowse
Gene Graph