Link to Y53F4B.6RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y48B6A.2.1Link to Y48B6A.2.2Link to Y48B6A.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:Y53F4B.i Ace View of JA:Y53F4B.i
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y53F4B.6
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:14985305..14987289)
Transcript overlap: 327 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 264
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.633
Wormbase (BLAST) RNAi primary
External "Y53F4B.6" Links  Wormbase NCBI
Gene Inhibited  Y48B6A.3
Description of "Y48B6A.3"  Associated GO Term : exonuclease activity
KOG Annotation  5'-3' exonuclease HKE1/RAT1
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 153
Relative score: 0.58 (Best raw score= for Gene )
Specificity index: 0.367
Wormbase (BLAST) RNAi secondary
External "Y48B6A.3" Links  Wormbase NCBI
JA:Y53F4B.i Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y53F4B.i Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y53F4B.i (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y53F4B.6 Browse using GBrowse
Gene Graph
Gene Plot of Y48B6A.3 Browse using GBrowse
Gene Graph