Link to Y53F4B.25Link to Y53F4B.26RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F59H6.5Link to ZK250.9Link to Y16E11A.2Link to F33H12.6Link to Y53F4B.7geneMap Link to T02H6.3RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T25D1.3RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y116A8C.41RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y54F10AM.7RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to K12B6.7RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T22G5.3Link to Y48A6C.2Link to F21D9.6geneMap Link to T05A7.9RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:Y53F4C.f Ace View of JA:Y53F4C.f
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y53F4B.25
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:15136131..15138559)
Transcript overlap: 499 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 394
Relative score: 0.301 (Best raw score= for Gene )
Specificity index: 0.168
Wormbase (BLAST) RNAi primary
External "Y53F4B.25" Links  Wormbase NCBI
Gene Inhibited  T02H6.3
Evidence for Inhibition 
Sliding Window Raw score: 1307
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.558
External "T02H6.3" Links  Wormbase NCBI
Gene Inhibited  T25D1.3
Description of "T25D1.3"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
Evidence for Inhibition 
Sliding Window Raw score: 90
Relative score: 0.069 (Best raw score= for Gene )
Specificity index: 0.038
External "T25D1.3" Links  Wormbase NCBI
Gene Inhibited  Y116A8C.41
Description of "Y116A8C.41"  Associated GO Term : G-protein coupled receptor activity
Evidence for Inhibition 
Sliding Window Raw score: 82
Relative score: 0.063 (Best raw score= for Gene )
Specificity index: 0.035
External "Y116A8C.41" Links  Wormbase NCBI
Gene Inhibited  Y54F10AM.7
Evidence for Inhibition 
Sliding Window Raw score: 164
Relative score: 0.125 (Best raw score= for Gene )
Specificity index: 0.07
External "Y54F10AM.7" Links  Wormbase NCBI
Gene Inhibited  K02E2.5
Evidence for Inhibition 
Sliding Window Raw score: 62
Relative score: 0.047 (Best raw score= for Gene )
Specificity index: 0.026
External "K02E2.5" Links  Wormbase NCBI
Gene Inhibited  K12B6.7
Evidence for Inhibition 
Sliding Window Raw score: 174
Relative score: 0.133 (Best raw score= for Gene )
Specificity index: 0.074
External "K12B6.7" Links  Wormbase NCBI
Gene Inhibited  T05A7.9
Evidence for Inhibition 
Sliding Window Raw score: 71
Relative score: 0.054 (Best raw score= for Gene )
Specificity index: 0.03
External "T05A7.9" Links  Wormbase NCBI
JA:Y53F4C.f Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y53F4C.f Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y53F4C.f (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of T02H6.3 Browse using GBrowse
Gene Graph
Gene Plot of Y53F4B.25 Browse using GBrowse
Gene Graph
Gene Plot of T25D1.3 Browse using GBrowse
Gene Graph
Gene Plot of Y116A8C.41 Browse using GBrowse
Gene Graph
Gene Plot of Y54F10AM.7 Browse using GBrowse
Gene Graph
Gene Plot of K02E2.5 Browse using GBrowse
Gene Graph
Gene Plot of K12B6.7 Browse using GBrowse
Gene Graph
Gene Plot of T05A7.9 Browse using GBrowse
Gene Graph