Link to Y53G8AR.6RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y53G8AR.7aLink to Y53G8AR.8RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:Y53G8A_1734.a Ace View of JA:Y53G8A_1734.a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y53G8AR.6
Description of "Y53G8AR.6"  Associated GO Term : DNA binding
KOG Annotation  Putative nucleic acid-binding protein Hcc-1/proliferation associated cytokine-inducible protein, contains SAP domain
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:3294241..3295116)
Transcript overlap: 254 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 233
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y53G8AR.6" Links  Wormbase NCBI
Gene Inhibited  Y53G8AR.8
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 78 nt Explain types of evidence for RNAi inhibition
Wormbase (BLAST) RNAi primary
External "Y53G8AR.8" Links  Wormbase NCBI
JA:Y53G8A_1734.a Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y53G8A_1734.a Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y53G8A_1734.a (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y53G8AR.8 Browse using GBrowse
Gene Graph
Gene Plot of Y53G8AR.6 Browse using GBrowse
Gene Graph