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RNAi Experiment: JA:Y53H1C.a Ace View of JA:Y53H1C.a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F56G4.5
Description of "F56G4.5"  This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
KOG Annotation  Peptide:N-glycanase
Thioredoxin
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:11386371..11388746)
Transcript overlap: 879 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 774
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F56G4.5" Links  Wormbase NCBI
Gene Inhibited  Y53H1C.1 (aat-9)
Description of "Y53H1C.1"  Associated GO Term : amino acid-polyamine transporter activity
Evidence for Inhibition 
ePCR Transcript overlap: 11 nt Explain types of evidence for RNAi inhibition
External "Y53H1C.1" Links  Wormbase NCBI
JA:Y53H1C.a Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y53H1C.a Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y53H1C.a (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F56G4.5 Browse using GBrowse
Gene Graph
Gene Plot of Y53H1C.1 Browse using GBrowse
Gene Graph