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RNAi Experiment: JA:Y54E10B_154.c Ace View of JA:Y54E10B_154.c
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y54E10BL.4 (dnj-28)
Description of "Y54E10BL.4"  This gene encodes a protein containing a DnaJ ('J') domain.
KOG Annotation  dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:2999067..3001459)
Transcript overlap: 828 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 786
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y54E10BL.4" Links  Wormbase NCBI
Gene Inhibited  Y54E10BL.5
KOG Annotation  NADH:ubiquinone oxidoreductase, NDUFS5/15kDa
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 33 nt Explain types of evidence for RNAi inhibition
External "Y54E10BL.5" Links  Wormbase NCBI
JA:Y54E10B_154.c Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y54E10B_154.c Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y54E10B_154.c (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y54E10BL.5 Browse using GBrowse
Gene Graph
Gene Plot of Y54E10BL.4 Browse using GBrowse
Gene Graph