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RNAi Experiment: JA:Y54E10B_159.a Ace View of JA:Y54E10B_159.a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y54E10BR.8
Description of "Y54E10BR.8"  Associated GO Term : nucleic acid binding
KOG Annotation  Zn-finger
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:3056852..3059492)
Transcript overlap: 852 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 663
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.766
Wormbase (BLAST) RNAi primary
External "Y54E10BR.8" Links  Wormbase NCBI
Gene Inhibited  Y54E10BR.1
Description of "Y54E10BR.1"  Associated GO Term : sulfuric ester hydrolase activity
KOG Annotation  Glycosylphosphatidylinositol anchor synthesis protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:3056852..3059492)
Transcript overlap: 223 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 202
Relative score: 0.305 (Best raw score= for Gene )
Specificity index: 0.234
Wormbase (BLAST) RNAi primary
External "Y54E10BR.1" Links  Wormbase NCBI
JA:Y54E10B_159.a Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y54E10B_159.a Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y54E10B_159.a (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y54E10BR.1 Browse using GBrowse
Gene Graph
Gene Plot of Y54E10BR.8 Browse using GBrowse
Gene Graph