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RNAi Experiment: JA:Y54E5B.3 Ace View of JA:Y54E5B.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y54E5B.3 (let-49)
Description of "Y54E5B.3"  let-49 encodes a putative mediator complex subunit zygotically required for postembryonic development and viability past larval stages, while being maternally required for germline and embryonic development; LET-49 is an ortholog of human CRSP9 (OMIM:605045) and of S. cerevisiae Med7p; Med7p is a component of a mediator complex that serves as a transcriptional coactivator, while CRSP9 mediates transcriptional activation by Sp1.
KOG Annotation  Transcriptional coactivator
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:14820407..14821476)
Transcript overlap: 713 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 609
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y54E5B.3" Links  Wormbase NCBI
JA:Y54E5B.3 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 80 % Led (Differentiated, not enclosed)
Adult  Rup
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
JA:Y54E5B.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y54E5B.3 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y54E5B.3 Browse using GBrowse
Gene Graph