Link to Y55F3AM.7RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C27C12.2geneMap Link to Y71H2AM.2RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F45H10.1.2Link to F45H10.1.1Link to F45H10.2.2Link to F45H10.2.1RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y51A2B.7Link to F19B2.4Link to K10G4.7Link to R11G11.10Link to T27C5.14geneMap Link to C27C12.2Link to C27C12.5RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y55F3AM.7geneMap
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RNAi Experiment: JA:Y55F3A_740.a Ace View of JA:Y55F3A_740.a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y55F3AM.7
Description of "Y55F3AM.7"  Associated GO Term : nucleic acid binding
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:989167..991287)
Transcript overlap: 427 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 343
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.429
Wormbase (BLAST) RNAi primary
External "Y55F3AM.7" Links  Wormbase NCBI
Gene Inhibited  Y71H2AM.2
Description of "Y71H2AM.2"  Associated GO Term : nucleic acid binding
KOG Annotation  Uncharacterized conserved protein, contains C4-type Zn-finger
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 59
External "Y71H2AM.2" Links  Wormbase NCBI
Gene Inhibited  F45H10.1 (alh-7)
Description of "F45H10.1"  alh-7 encodes an ortholog of the human gene DJ73M23.2 (NAD+-DEPENDENT SUCCINIC SEMIALDEHYDE DEHYDROGENASE; ALDH5A1), which when mutated leads to SSADH deficiency (OMIM:271980).
KOG Annotation  Aldehyde dehydrogenase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 68
Relative score: 0.198 (Best raw score= for Gene )
Specificity index: 0.085
External "F45H10.1" Links  Wormbase NCBI
Gene Inhibited  K07E8.12 (sri-44)
Evidence for Inhibition 
Sliding Window Raw score: 329
Relative score: 0.959 (Best raw score= for Gene )
Specificity index: 0.411
External "K07E8.12" Links  Wormbase NCBI
Gene Inhibited  C27C12.2
Description of "C27C12.2"  C27C12.2 is orthologous to the human gene BA436D10.3 (EARLY GROWTH RESPONSE 2 (KROX-20 (DROSOPHILA) HOMOLOG)) (EGR2; OMIM:129010), which when mutated leads to disease.
KOG Annotation  Zn-finger
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 60
Relative score: 0.175 (Best raw score= for Gene )
Specificity index: 0.075
External "C27C12.2" Links  Wormbase NCBI
JA:Y55F3A_740.a Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y55F3A_740.a Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y55F3A_740.a (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y71H2AM.2 Browse using GBrowse
Gene Graph
Gene Plot of Y55F3AM.7 Browse using GBrowse
Gene Graph
Gene Plot of F45H10.1 Browse using GBrowse
Gene Graph
Gene Plot of K07E8.12 Browse using GBrowse
Gene Graph
Gene Plot of C27C12.2 Browse using GBrowse
Gene Graph