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RNAi Experiment: JA:Y57A10A.ee Ace View of JA:Y57A10A.ee
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y57A10A.30 (ife-5)
Description of "Y57A10A.30"  ife-5 encodes a member of the Initiation Factor 4E (eIF4E) family; it is expressed in the germ line.
KOG Annotation  Translation initiation factor 4F, cap-binding subunit (eIF-4E) and related cap-binding proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:12282877..12284050)
Transcript overlap: 997 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 934
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.858
Wormbase (BLAST) RNAi primary
External "Y57A10A.30" Links  Wormbase NCBI
Gene Inhibited  C56G3.2
Description of "C56G3.2"  Associated GO Term : oxidoreductase activity
KOG Annotation  Aldo/keto reductase family proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 80
Relative score: 0.086 (Best raw score= for Gene )
Specificity index: 0.073
Wormbase (BLAST) RNAi primary
External "C56G3.2" Links  Wormbase NCBI
Gene Inhibited  B0047.4
Evidence for Inhibition 
Sliding Window Raw score: 75
Relative score: 0.08 (Best raw score= for Gene )
Specificity index: 0.069
Wormbase (BLAST) RNAi primary
External "B0047.4" Links  Wormbase NCBI
JA:Y57A10A.ee Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y57A10A.ee Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y57A10A.ee (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C56G3.2 Browse using GBrowse
Gene Graph
Gene Plot of B0047.4 Browse using GBrowse
Gene Graph
Gene Plot of Y57A10A.30 Browse using GBrowse
Gene Graph