Link to Y57G11C.19RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F54H12.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C06G3.12geneMap
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RNAi Experiment: JA:Y57G11C.19 Ace View of JA:Y57G11C.19
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y57G11C.19
Description of "Y57G11C.19"  Associated GO Term : chromatin binding
KOG Annotation  Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:14839159..14840192)
Transcript overlap: 1012 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 991
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.646
Wormbase (BLAST) RNAi primary
External "Y57G11C.19" Links  Wormbase NCBI
Gene Inhibited  F54H12.3
Description of "F54H12.3"  Associated GO Term : DNA binding
KOG Annotation  Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:7960407..7961440)
Transcript overlap: 760 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 543
Relative score: 0.548 (Best raw score= for Gene )
Specificity index: 0.354
Wormbase (BLAST) RNAi primary
External "F54H12.3" Links  Wormbase NCBI
JA:Y57G11C.19 Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y57G11C.19 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y57G11C.19 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F54H12.3 Browse using GBrowse
Gene Graph
Gene Plot of Y57G11C.19 Browse using GBrowse
Gene Graph