Link to Y57G7A.8RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C18H2.1Link to Y71A12B.14geneMap Link to Y38H8A.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to M117.6Link to Y71A12B.14geneMap Link to Y40H7A.7Link to Y40H7A.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y57G7A.8Link to C18H2.1Link to Y71A12B.14geneMap Link to C18H2.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y57G7A.8Link to Y40H7A.7geneMap Link to M117.6RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y38H8A.7Link to Y71A12B.14geneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y57G7A.8Link to Y38H8A.7geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:Y57G7A.8 Ace View of JA:Y57G7A.8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y57G7A.8
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:1290719..1292128)
Transcript overlap: 957 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 792
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.522
Wormbase (BLAST) RNAi primary
External "Y57G7A.8" Links  Wormbase NCBI
Gene Inhibited  Y38H8A.7
Evidence for Inhibition 
Sliding Window Raw score: 88
Relative score: 0.111 (Best raw score= for Gene )
Specificity index: 0.058
Wormbase (BLAST) RNAi primary
External "Y38H8A.7" Links  Wormbase NCBI
Gene Inhibited  Y40H7A.7
Evidence for Inhibition 
Sliding Window Raw score: 161
Relative score: 0.203 (Best raw score= for Gene )
Specificity index: 0.106
Wormbase (BLAST) RNAi primary
External "Y40H7A.7" Links  Wormbase NCBI
Gene Inhibited  C18H2.1
Description of "C18H2.1"  Associated GO Term : intracellular
Evidence for Inhibition 
Sliding Window Raw score: 149
Relative score: 0.188 (Best raw score= for Gene )
Specificity index: 0.098
Wormbase (BLAST) RNAi primary
External "C18H2.1" Links  Wormbase NCBI
Gene Inhibited  M117.6
Evidence for Inhibition 
Sliding Window Raw score: 67
Relative score: 0.085 (Best raw score= for Gene )
Specificity index: 0.044
External "M117.6" Links  Wormbase NCBI
Gene Inhibited  Y71A12B.14
Evidence for Inhibition 
Sliding Window Raw score: 260
Relative score: 0.328 (Best raw score= for Gene )
Specificity index: 0.171
Wormbase (BLAST) RNAi primary
External "Y71A12B.14" Links  Wormbase NCBI
JA:Y57G7A.8 Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y57G7A.8 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y57G7A.8 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y40H7A.7 Browse using GBrowse
Gene Graph
Gene Plot of Y38H8A.7 Browse using GBrowse
Gene Graph
Gene Plot of C18H2.1 Browse using GBrowse
Gene Graph
Gene Plot of M117.6 Browse using GBrowse
Gene Graph
Gene Plot of Y57G7A.8 Browse using GBrowse
Gene Graph
Gene Plot of Y71A12B.14 Browse using GBrowse
Gene Graph