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RNAi Experiment: JA:Y65B4A_182.a Ace View of JA:Y65B4A_182.a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y65B4A.7
Description of "Y65B4A.7"  Associated GO Term : zinc ion binding
KOG Annotation  Adaptor protein Enigma and related PDZ-LIM proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:644813..646002)
Transcript overlap: 300 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 219
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.695
Wormbase (BLAST) RNAi primary
External "Y65B4A.7" Links  Wormbase NCBI
Gene Inhibited  Y65B4A.2
Description of "Y65B4A.2"  Associated GO Term : cysteine-type peptidase activity
KOG Annotation  Cysteine proteinase Cathepsin L
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:644813..646002)
Transcript overlap: 117 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 96
Relative score: 0.438 (Best raw score= for Gene )
Specificity index: 0.305
Wormbase (BLAST) RNAi primary
External "Y65B4A.2" Links  Wormbase NCBI
JA:Y65B4A_182.a Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y65B4A_182.a Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y65B4A_182.a (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y65B4A.7 Browse using GBrowse
Gene Graph
Gene Plot of Y65B4A.2 Browse using GBrowse
Gene Graph