Link to Y69H2.13Link to Y69H2.3bLink to Y69H2.3cRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y69H2.2Link to Y69H2.11geneMap Link to Y69H2.13Link to Y69H2.3bLink to Y69H2.3cLink to Y69H2.3d.1Link to Y69H2.3a.1Link to Y69H2.3a.2Link to Y69H2.3d.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y69H2.2Link to Y69H2.11Link to Y69H2.10bgeneMap Link to Y69H2.11RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y69H2.12Link to Y69H2.2Link to Y69H2.13geneMap Link to Y69H2.2RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y69H2.13Link to Y69H2.11geneMap
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RNAi Experiment: JA:Y69H2.13 Ace View of JA:Y69H2.13
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y69H2.13
Description of "Y69H2.13"  Associated GO Term : sodium channel activity
KOG Annotation  Non voltage-gated ion channels (DEG/ENaC family)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:18657196..18658699)
Transcript overlap: 723 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 597
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.724
Wormbase (BLAST) RNAi primary
External "Y69H2.13" Links  Wormbase NCBI
Gene Inhibited  Y69H2.3
Evidence for Inhibition 
ePCR Transcript overlap: 17 nt Explain types of evidence for RNAi inhibition
External "Y69H2.3" Links  Wormbase NCBI
Gene Inhibited  Y69H2.11
Description of "Y69H2.11"  Associated GO Term : sodium channel activity
KOG Annotation  Fibrillins and related proteins containing Ca2+-binding EGF-like domains
Non voltage-gated ion channels (DEG/ENaC family)
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 89
Relative score: 0.149 (Best raw score= for Gene )
Specificity index: 0.108
Wormbase (BLAST) RNAi secondary
External "Y69H2.11" Links  Wormbase NCBI
Gene Inhibited  Y69H2.2
Description of "Y69H2.2"  Associated GO Term : sodium channel activity
KOG Annotation  Fibrillins and related proteins containing Ca2+-binding EGF-like domains
Non voltage-gated ion channels (DEG/ENaC family)
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 139
Relative score: 0.233 (Best raw score= for Gene )
Specificity index: 0.168
Wormbase (BLAST) RNAi secondary
External "Y69H2.2" Links  Wormbase NCBI
JA:Y69H2.13 Phenotypes Help with Phenotypes
Phenotype  WT
JA:Y69H2.13 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_Y69H2.13 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y69H2.11 Browse using GBrowse
Gene Graph
Gene Plot of Y69H2.3 Browse using GBrowse
Gene Graph
Gene Plot of Y69H2.13 Browse using GBrowse
Gene Graph
Gene Plot of Y69H2.2 Browse using GBrowse
Gene Graph